Azure FHIR
Provides secure access to Azure Health Data Services FHIR servers, enabling authenticated retrieval ...
Log in to the Azure Portal
Visit https://portal.azure.com and sign in with your Azure account.Register an Application in Azure AD
Go to "Azure Active Directory" → "App registrations".
Click "New registration".- Name your app (e.g., "Azure FHIR MCP Server").
- Set the "Supported account types" as appropriate for your use case.
- Click "Register".
Obtain the Application (Client) ID
After registration, copy the "Application (client) ID" value for later use asclientId.Create a Client Secret
In your app registration, go to "Certificates & secrets" → "Client secrets".
Click "New client secret", provide a description, and choose an expiration period.
Click "Add".
Copy the "Value" field immediately—this will be yourclientSecret. (You won’t be able to view it again later.)Get Your Tenant ID
In Azure Active Directory, click "Overview".
Copy the "Tenant ID" value for use astenantId.Get the FHIR Server URL
Go to your Azure Health Data Services resource (FHIR).
Under the "Overview" or "Properties" tab, copy the "FHIR Server URL" (it will look likehttps://your-fhir-server.azurehealthcareapis.com/fhir).Add ENV Values via FastMCP
In the FastMCP connection interface, click the "Install Now" button for the Azure AHDS FHIR MCP server.
When prompted, fill in the following values:fhirUrl: (Paste your FHIR Server URL)clientId: (Paste your Application (client) ID)clientSecret: (Paste your generated Client Secret)tenantId: (Paste your Tenant ID)
Complete Setup
Save your changes. If required, restart FastMCP or Claude Desktop for the configuration to take effect.
Your Azure FHIR MCP server should now be configured and ready to use!
Quick Start
Choose Connection Type for
Authentication Required
Please sign in to use FastMCP hosted connections
Configure Environment Variables for
Please provide values for the following environment variables:
started!
The MCP server should open in . If it doesn't open automatically, please check that you have the application installed.
Copy and run this command in your terminal:
Make sure Gemini CLI is installed:
Visit Gemini CLI documentation for installation instructions.
Make sure Claude Code is installed:
Visit Claude Code documentation for installation instructions.
Installation Steps:
Configuration
Installation Failed
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